= Notes on using SNP Scanner software from Princeton = Software is available here: http://genomics-pubs.princeton.edu/SNPscanner/ === August 2008 === * WARNING: SNPScanner depends on version 3 CEL files (see below), but will not report an error if started with other file versions. Instead it will appear to run INDEFINITELY. * The README bug report address (ruderfer@princeton.edu) is out of date. == Affy CEL file types == SNPScanner depends on version 3 CEL files. Modern Affy systems (2008) using Command Console produce version 4 CEL files. However, there are two types of version 4 CEL files. Affy provides two utilities for converting CEL files.